Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylpropionate dioxygenase ferredoxin reductase subunit | FE383_RS12940 | Not Available | Positive | 2635809 - 2637011 | 43980.8 |
| doxx family protein | FE383_RS12945 | Not Available | Positive | 2637108 - 2637530 | 15212.3 |
| aldose 1-epimerase | FE383_RS12950 | Not Available | Negative | 2637578 - 2638450 | 32718.1 |
| zinc-dependent alcohol dehydrogenase family protein | FE383_RS12955 | Not Available | Negative | 2638462 - 2639556 | 39355.7 |
| abc transporter permease | FE383_RS12960 | Not Available | Negative | 2639589 - 2640587 | 34485.6 |
| sugar abc transporter atp-binding protein | FE383_RS12965 | Not Available | Negative | 2640612 - 2642123 | 55019.8 |
| substrate-binding domain-containing protein | FE383_RS12970 | Not Available | Negative | 2642146 - 2643129 | 35060.2 |
| duf5107 domain-containing protein | FE383_RS12975 | Not Available | Negative | 2643226 - 2646507 | 123839.0 |
| rok family protein | FE383_RS12980 | Not Available | Positive | 2646625 - 2647818 | 44523.2 |
| hypothetical protein | FE383_RS22760 | Not Available | Negative | 2647878 - 2647976 | 3362.04 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





