Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type 3 dihydrofolate reductase | FE383_RS00225 | Not Available | Positive | 49822 - 50301 | 18000.3 |
| bis(5'-nucleosyl)-tetraphosphatase (symmetrical) apah | FE383_RS00230 | Not Available | Negative | 50379 - 51221 | 31298.4 |
| co2+/mg2+ efflux protein apag | FE383_RS00235 | Not Available | Negative | 51228 - 51605 | 13867.6 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | FE383_RS00240 | Not Available | Negative | 51608 - 52429 | 30422.0 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | FE383_RS00245 | Not Available | Negative | 52426 - 53415 | 35115.9 |
| peptidylprolyl isomerase sura | FE383_RS00250 | Not Available | Negative | 53415 - 54701 | 47286.5 |
| lps assembly protein lptd | FE383_RS00255 | Not Available | Negative | 54754 - 57108 | 89675.8 |
| co-chaperone djla | FE383_RS00260 | Not Available | Positive | 57363 - 58178 | 30581.2 |
| protein yabp | FE383_RS00265 | Not Available | Positive | 58473 - 59123 | 24792.2 |
| protein yabq | FE383_RS22330 | Not Available | Positive | 59120 - 59278 | 5737.08 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





