Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-barrel assembly-enhancing protease | FE383_RS12700 | Not Available | Positive | 2579856 - 2581319 | 53911.1 |
| arsenate reductase (glutaredoxin) | FE383_RS12705 | Not Available | Positive | 2581340 - 2581699 | 13399.4 |
| dnaa inactivator hda | FE383_RS12710 | Not Available | Negative | 2581837 - 2582538 | 26634.2 |
| uracil permease | FE383_RS12715 | Not Available | Negative | 2582633 - 2583922 | 45063.0 |
| uracil phosphoribosyltransferase | FE383_RS12720 | Not Available | Negative | 2584008 - 2584634 | 22534.6 |
| phosphoribosylformylglycinamidine cyclo-ligase | FE383_RS12725 | Not Available | Positive | 2584959 - 2585996 | 36856.2 |
| phosphoribosylglycinamide formyltransferase | FE383_RS12730 | Not Available | Positive | 2585996 - 2586634 | 23239.6 |
| polyphosphate kinase 1 | FE383_RS12735 | Not Available | Positive | 2586806 - 2588872 | 80436.1 |
| exopolyphosphatase | FE383_RS12740 | Not Available | Positive | 2588877 - 2590418 | 58139.5 |
| cyclic-guanylate-specific phosphodiesterase pdef | FE383_RS12745 | Not Available | Negative | 2590457 - 2592700 | 85612.8 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





