Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase 4 subunit hyfd | FE383_RS12650 | Not Available | Positive | 2568573 - 2570012 | 51757.7 |
| hydrogenase 4 membrane subunit | FE383_RS12655 | Not Available | Positive | 2570024 - 2570674 | 23363.0 |
| hydrogenase 4 subunit f | FE383_RS12660 | Not Available | Positive | 2570679 - 2572259 | 56770.7 |
| hydrogenase 4 catalytic subunit hyfg | FE383_RS12665 | Not Available | Positive | 2572249 - 2573916 | 63387.1 |
| hydrogenase 4 subunit h | FE383_RS12670 | Not Available | Positive | 2573926 - 2574471 | 20160.4 |
| hydrogenase 4 catalytic subunit hyfi | FE383_RS12675 | Not Available | Positive | 2574468 - 2575226 | 28102.9 |
| hydrogenase 4 assembly chaperone hyfj | FE383_RS12680 | Not Available | Positive | 2575219 - 2575632 | 15577.8 |
| dna-binding transcriptional regulator hyfr | FE383_RS12685 | Not Available | Positive | 2575662 - 2577674 | 75309.7 |
| formate transporter focb | FE383_RS12690 | Not Available | Positive | 2577696 - 2578544 | 30566.4 |
| ai-2e family transporter | FE383_RS12695 | Not Available | Negative | 2578582 - 2579643 | 39196.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





