Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna cytosine(34) acetyltransferase tmca | FE383_RS12600 | Not Available | Negative | 2557606 - 2559621 | 74896.7 |
| neutral zinc metallopeptidase | FE383_RS12605 | Not Available | Negative | 2559636 - 2560499 | 31462.0 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | FE383_RS12610 | Not Available | Negative | 2560667 - 2561380 | 26996.5 |
| outer membrane protein assembly factor bamc | FE383_RS12615 | Not Available | Negative | 2561593 - 2562627 | 36844.5 |
| 4-hydroxy-tetrahydrodipicolinate synthase | FE383_RS12620 | Not Available | Negative | 2562644 - 2563522 | 31271.8 |
| glycine cleavage system transcriptional repressor | FE383_RS12625 | Not Available | Positive | 2563668 - 2564240 | 20769.8 |
| thioredoxin-dependent thiol peroxidase | FE383_RS12630 | Not Available | Positive | 2564240 - 2564710 | 17634.9 |
| hydrogenase 4 subunit hyfa | FE383_RS12635 | Not Available | Positive | 2564963 - 2565580 | 22155.5 |
| hydrogenase 4 subunit b | FE383_RS12640 | Not Available | Positive | 2565580 - 2567598 | 72587.4 |
| hydrogenase 4 subunit hyfc | FE383_RS12645 | Not Available | Positive | 2567609 - 2568556 | 34361.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





