Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional regulator murr | FE383_RS12400 | Not Available | Negative | 2515296 - 2516153 | 31193.6 |
| n-acetylmuramic acid 6-phosphate etherase | FE383_RS12405 | Not Available | Positive | 2516317 - 2517213 | 31221.8 |
| pts n-acetylmuramic acid transporter subunit iibc | FE383_RS12410 | Not Available | Positive | 2517217 - 2518641 | 49805.0 |
| penicillin binding protein pbp4b | FE383_RS12415 | Not Available | Positive | 2518646 - 2519950 | 47755.1 |
| porphyrinogen peroxidase | FE383_RS12420 | Not Available | Negative | 2520190 - 2521089 | 33054.1 |
| rpoe-regulated lipoprotein | FE383_RS12425 | Not Available | Negative | 2521185 - 2521760 | 20898.7 |
| duf2919 domain-containing protein | FE383_RS12430 | Not Available | Negative | 2521821 - 2522270 | 17169.4 |
| gnat family acetyltransferase | FE383_RS12435 | Not Available | Negative | 2522257 - 2522682 | 16312.5 |
| n-acetylmuramoyl-l-alanine amidase amia | FE383_RS12440 | Not Available | Positive | 2522896 - 2523765 | 31413.9 |
| oxygen-dependent coproporphyrinogen oxidase | FE383_RS12445 | Not Available | Positive | 2523769 - 2524668 | 34324.4 |
Pathways
12929 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





