Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein ompk | FE383_RS12300 | Not Available | Positive | 2495671 - 2496435 | 29233.7 |
| lysr family transcriptional regulator | FE383_RS12305 | Not Available | Negative | 2496474 - 2497400 | 33905.1 |
| bile acid:sodium symporter family protein | FE383_RS12310 | Not Available | Positive | 2497490 - 2498488 | 36407.8 |
| duf3820 family protein | FE383_RS12315 | Not Available | Negative | 2498485 - 2498703 | 8415.57 |
| nad-dependent dna ligase liga | FE383_RS12320 | Not Available | Negative | 2498705 - 2500720 | 73610.3 |
| cell division protein zipa | FE383_RS12325 | Not Available | Negative | 2500791 - 2501777 | 36477.4 |
| sulfate transporter cysz | FE383_RS12330 | Not Available | Positive | 2502007 - 2502768 | 29306.6 |
| cysteine synthase a | FE383_RS12335 | Not Available | Positive | 2502953 - 2503924 | 34491.7 |
| phosphocarrier protein hpr | FE383_RS12340 | Not Available | Positive | 2504308 - 2504565 | 9119.89 |
| phosphoenolpyruvate-protein phosphotransferase ptsi | FE383_RS12345 | Not Available | Positive | 2504610 - 2506337 | 63565.6 |
Pathways
12726 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





