Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate--trna ligase | FE383_RS12250 | Not Available | Negative | 2489801 - 2491216 | 53818.6 |
| Trna-val | Not Available | Not Available | Positive | 2491475 - 2491550 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 2491595 - 2491670 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 2491717 - 2491792 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 2491797 - 2491872 | Not Available |
| Ncrna_class:other | Not Available | Not Available | Positive | 2491903 - 2492028 | Not Available |
| dna-binding transcriptional regulator xapr | FE383_RS12280 | Not Available | Negative | 2492137 - 2493021 | 33629.4 |
| duf1427 family protein | FE383_RS12285 | Not Available | Negative | 2493062 - 2493220 | 5691.39 |
| xanthosine/proton symporter xapb | FE383_RS12290 | Not Available | Negative | 2493273 - 2494529 | 46142.5 |
| xanthosine phosphorylase | FE383_RS12295 | Not Available | Negative | 2494589 - 2495422 | 29836.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





