Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ion channel protein | FE383_RS12200 | Not Available | Positive | 2480174 - 2481430 | 43576.4 |
| duf2502 domain-containing protein ypec | FE383_RS12205 | Not Available | Positive | 2481545 - 2481871 | 13263.4 |
| nramp family divalent metal transporter | FE383_RS12210 | Not Available | Negative | 2482012 - 2483250 | 44196.5 |
| nucleoside permease nupc | FE383_RS12215 | Not Available | Positive | 2483586 - 2484788 | 43478.4 |
| is4-like element is421 family transposase | FE383_RS12220 | Not Available | Positive | 2484875 - 2485987 | 40911.1 |
| sensor domain-containing phosphodiesterase | FE383_RS12225 | Not Available | Negative | 2486187 - 2488376 | 83529.1 |
| Trna-ala | Not Available | Not Available | Positive | 2488585 - 2488660 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 2488700 - 2488775 | Not Available |
| yfec-like transcriptional regulator | FE383_RS12240 | Not Available | Positive | 2488996 - 2489355 | 13412.3 |
| merr family transcriptional regulator | FE383_RS12245 | Not Available | Positive | 2489357 - 2489749 | 14911.0 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





