Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acid-sensing system histidine kinase evgs | FE383_RS12100 | Not Available | Positive | 2454918 - 2458511 | 134780.0 |
| coa:oxalate coa-transferase | FE383_RS12105 | Not Available | Negative | 2458567 - 2459712 | 41673.2 |
| transporter yfdv | FE383_RS12110 | Not Available | Negative | 2459786 - 2460730 | 33617.9 |
| oxalyl-coa decarboxylase | FE383_RS12115 | Not Available | Negative | 2460800 - 2462494 | 60584.8 |
| formyl-coa transferase | FE383_RS12120 | Not Available | Negative | 2462548 - 2463798 | 45830.7 |
| yfdx family protein | FE383_RS12125 | Not Available | Negative | 2464311 - 2464946 | 22978.5 |
| colanic acid biosynthesis lipoprotein ypdi | FE383_RS12130 | Not Available | Positive | 2465242 - 2465517 | 10162.5 |
| yfdy family protein | FE383_RS12135 | Not Available | Negative | 2465594 - 2465836 | 8874.43 |
| kdo(2)-lipid iv(a) palmitoleoyltransferase | FE383_RS12140 | Not Available | Positive | 2466189 - 2467109 | 35495.5 |
| membrane protein ypdk | FE383_RS12145 | Not Available | Positive | 2467465 - 2467536 | 2714.61 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





