Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa c-acyltransferase fadi | FE383_RS11950 | Not Available | Negative | 2429703 - 2431013 | 46533.3 |
| yfcz/yiis family protein | FE383_RS11955 | Not Available | Negative | 2431194 - 2431478 | 10318.2 |
| long-chain fatty acid transporter fadl | FE383_RS11960 | Not Available | Positive | 2431850 - 2433190 | 48544.1 |
| protein yfdf | FE383_RS11965 | Not Available | Positive | 2433556 - 2434614 | 40250.7 |
| phospholipid-binding lipoprotein mlaa | FE383_RS11970 | Not Available | Negative | 2434796 - 2435551 | 28043.2 |
| d-serine transporter dsdx | FE383_RS12075 | Not Available | Positive | 2448391 - 2449728 | 47166.2 |
| d-serine ammonia-lyase | FE383_RS12080 | Not Available | Positive | 2449746 - 2451074 | 47903.3 |
| multidrug efflux mfs transporter permease subunit emry | FE383_RS12085 | Not Available | Negative | 2451182 - 2452720 | 56004.4 |
| multidrug efflux mfs transporter periplasmic adaptor subunit emrk | FE383_RS12090 | Not Available | Negative | 2452720 - 2453883 | 42587.9 |
| acid-sensing system dna-binding response regulator evga | FE383_RS12095 | Not Available | Positive | 2454299 - 2454913 | 22691.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





