Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagella biosynthesis regulator flk | FE383_RS11850 | Not Available | Positive | 2408494 - 2409489 | 36670.5 |
| mfs transporter | FE383_RS11855 | Not Available | Negative | 2409486 - 2410664 | 40467.7 |
| beta-ketoacyl-acp synthase i | FE383_RS11860 | Not Available | Negative | 2410929 - 2412149 | 42615.9 |
| bifunctional trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmd/fad-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase mnmc | FE383_RS11865 | Not Available | Positive | 2412308 - 2414314 | 74438.1 |
| yfcl family protein | FE383_RS11870 | Not Available | Negative | 2414435 - 2414713 | 10000.6 |
| elongation factor p hydroxylase | FE383_RS11875 | Not Available | Negative | 2414747 - 2415295 | 21146.6 |
| sulfite exporter taue/safe family protein | FE383_RS11880 | Not Available | Negative | 2415295 - 2416104 | 28645.2 |
| penicillin-insensitive murein endopeptidase | FE383_RS11885 | Not Available | Negative | 2416104 - 2416928 | 30138.4 |
| chorismate synthase | FE383_RS11890 | Not Available | Negative | 2416932 - 2418017 | 39139.8 |
| 50s ribosomal protein l3 n(5)-glutamine methyltransferase | FE383_RS11895 | Not Available | Negative | 2418052 - 2418984 | 35003.6 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





