Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavin prenyltransferase ubix | FE383_RS11800 | Not Available | Negative | 2398601 - 2399170 | 20696.3 |
| amidophosphoribosyltransferase | FE383_RS11805 | Not Available | Negative | 2399265 - 2400782 | 56491.3 |
| colicin v production protein | FE383_RS11810 | Not Available | Negative | 2400819 - 2401307 | 17908.0 |
| cell division protein dedd | FE383_RS11815 | Not Available | Negative | 2401566 - 2402228 | 22939.8 |
| bifunctional tetrahydrofolate synthase/dihydrofolate synthase | FE383_RS11820 | Not Available | Negative | 2402218 - 2403486 | 45408.2 |
| acetyl-coa carboxylase, carboxyltransferase subunit beta | FE383_RS11825 | Not Available | Negative | 2403556 - 2404470 | 33323.9 |
| deda family protein | FE383_RS11830 | Not Available | Negative | 2404626 - 2405285 | 24511.7 |
| trna pseudouridine(38-40) synthase trua | FE383_RS11835 | Not Available | Negative | 2405368 - 2406180 | 30401.3 |
| aspartate-semialdehyde dehydrogenase | FE383_RS11840 | Not Available | Negative | 2406180 - 2407193 | 36366.1 |
| 4-phosphoerythronate dehydrogenase pdxb | FE383_RS11845 | Not Available | Negative | 2407259 - 2408395 | 41370.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





