Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione transferase | FE383_RS11750 | Not Available | Negative | 2390385 - 2391029 | 24327.0 |
| gsh-dependent disulfide bond oxidoreductase | FE383_RS11755 | Not Available | Positive | 2391165 - 2391812 | 24517.2 |
| dihydroneopterin triphosphate 2'-epimerase | FE383_RS11760 | Not Available | Positive | 2391869 - 2392231 | 14082.8 |
| tigr01777 family oxidoreductase | FE383_RS11765 | Not Available | Positive | 2392252 - 2393145 | 32700.7 |
| recombination-promoting nuclease rpnb | FE383_RS11770 | Not Available | Negative | 2393193 - 2394083 | 34203.5 |
| histidine abc transporter atp-binding protein hisp | FE383_RS11775 | Not Available | Negative | 2394280 - 2395053 | 28654.8 |
| abc transporter permease | FE383_RS11780 | Not Available | Negative | 2395061 - 2395777 | 26871.3 |
| histidine abc transporter permease hisq | FE383_RS11785 | Not Available | Negative | 2395774 - 2396460 | 24650.8 |
| histidine abc transporter substrate-binding protein hisj | FE383_RS11790 | Not Available | Negative | 2396550 - 2397332 | 28484.9 |
| lysine/arginine/ornithine abc transporter substrate-binding protein argt | FE383_RS11795 | Not Available | Negative | 2397553 - 2398335 | 27993.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





