Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fkbp-type peptidyl-prolyl cis-trans isomerase | FE383_RS00125 | Not Available | Positive | 25826 - 26275 | 16081.9 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | FE383_RS00130 | Not Available | Positive | 26277 - 27227 | 34776.6 |
| ribonucleoside hydrolase rihc | FE383_RS00135 | Not Available | Positive | 27293 - 28207 | 32562.7 |
| 4-hydroxy-tetrahydrodipicolinate reductase | FE383_RS00140 | Not Available | Positive | 28374 - 29195 | 28758.3 |
| glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | FE383_RS00145 | Not Available | Positive | 29651 - 30799 | 41433.4 |
| carbamoyl-phosphate synthase large subunit | FE383_RS00150 | Not Available | Positive | 30817 - 34038 | 117849.0 |
| carnitine metabolism transcriptional regulator caif | FE383_RS00155 | Not Available | Positive | 34300 - 34695 | 15437.1 |
| carnitine operon protein caie | FE383_RS00160 | Not Available | Negative | 34781 - 35371 | 21245.7 |
| crotonobetainyl-coa hydratase | FE383_RS00165 | Not Available | Negative | 35377 - 36162 | 28191.8 |
| crotonobetaine/carnitine-coa ligase | FE383_RS00170 | Not Available | Negative | 36271 - 37824 | 58562.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





