Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5'-deoxynucleotidase | FE383_RS11700 | Not Available | Positive | 2379406 - 2380005 | 22709.3 |
| slc13 family permease | FE383_RS11705 | Not Available | Negative | 2380064 - 2381896 | 65876.0 |
| hexitol phosphatase hxpa | FE383_RS11710 | Not Available | Negative | 2381983 - 2382633 | 23066.9 |
| yfbu family protein | FE383_RS11715 | Not Available | Negative | 2382644 - 2383138 | 19537.4 |
| terminus macrodomain insulation protein yfbv | FE383_RS11720 | Not Available | Negative | 2383221 - 2383676 | 17214.1 |
| acetate kinase | FE383_RS11725 | Not Available | Positive | 2384014 - 2385216 | 43293.0 |
| phosphate acetyltransferase | FE383_RS11730 | Not Available | Positive | 2385291 - 2387435 | 77176.6 |
| putative basic amino acid antiporter yfcc | FE383_RS11735 | Not Available | Positive | 2387625 - 2389145 | 54800.0 |
| nudix hydrolase yfcd | FE383_RS11740 | Not Available | Negative | 2389178 - 2389720 | 20376.9 |
| phosphodiesterase | FE383_RS11745 | Not Available | Negative | 2389778 - 2390329 | 19992.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





