Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m28 family metallopeptidase | FE383_RS11600 | Not Available | Positive | 2356404 - 2357375 | 35932.8 |
| yfbm family protein | FE383_RS11605 | Not Available | Positive | 2357478 - 2357981 | 19019.8 |
| protein yfbn | FE383_RS11610 | Not Available | Negative | 2358254 - 2358970 | 27992.7 |
| protein yfbo | FE383_RS11615 | Not Available | Positive | 2359179 - 2359601 | 16163.8 |
| tetratricopeptide repeat protein yfbp | FE383_RS11620 | Not Available | Positive | 2359660 - 2360508 | 32137.9 |
| nadh-quinone oxidoreductase subunit nuon | FE383_RS11625 | Not Available | Negative | 2360592 - 2362049 | 52047.3 |
| nadh-quinone oxidoreductase subunit m | FE383_RS11630 | Not Available | Negative | 2362056 - 2363585 | 56527.9 |
| nadh-quinone oxidoreductase subunit l | FE383_RS11635 | Not Available | Negative | 2363749 - 2365590 | 66442.1 |
| nadh-quinone oxidoreductase subunit nuok | FE383_RS11640 | Not Available | Negative | 2365587 - 2365889 | 10845.8 |
| nadh-quinone oxidoreductase subunit j | FE383_RS11645 | Not Available | Negative | 2365886 - 2366440 | 19903.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





