Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FE383_RS11360 | Not Available | Positive | 2296652 - 2297837 | 40424.1 |
| yfap family protein | FE383_RS11365 | Not Available | Negative | 2297911 - 2298687 | 28305.2 |
| yfaq family protein | FE383_RS11370 | Not Available | Negative | 2298692 - 2300341 | 61479.1 |
| hypothetical protein | FE383_RS11375 | Not Available | Negative | 2300342 - 2304856 | 166228.0 |
| duf1175 domain-containing protein | FE383_RS11380 | Not Available | Negative | 2304880 - 2305503 | 23768.5 |
| duf2138 domain-containing protein | FE383_RS11385 | Not Available | Negative | 2305500 - 2307188 | 62674.7 |
| dna topoisomerase (atp-hydrolyzing) subunit a | FE383_RS11390 | Not Available | Negative | 2307337 - 2309964 | 96969.3 |
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | FE383_RS11395 | Not Available | Positive | 2310111 - 2310833 | 26557.0 |
| aida-i family autotransporter adhesin yfal/ehac | FE383_RS11400 | Not Available | Negative | 2310961 - 2314713 | 131160.0 |
| protein ypab | FE383_RS22755 | Not Available | Negative | 2315138 - 2315281 | 5325.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





