Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad:protein fmn transferase apbe | FE383_RS11310 | Not Available | Negative | 2281022 - 2282077 | 38551.0 |
| porin ompc | FE383_RS11315 | Not Available | Negative | 2282189 - 2283292 | 40370.3 |
| phosphotransferase rcsd | FE383_RS11320 | Not Available | Positive | 2284031 - 2286703 | 100378.0 |
| response regulator transcription factor rcsb | FE383_RS11325 | Not Available | Positive | 2286720 - 2287370 | 23672.0 |
| two-component system sensor histidine kinase rcsc | FE383_RS11330 | Not Available | Negative | 2287570 - 2290419 | 106513.0 |
| two-component system sensor histidine kinase atos | FE383_RS11335 | Not Available | Positive | 2290586 - 2292412 | 67794.1 |
| acetoacetate metabolism transcriptional regulator atoc | FE383_RS11340 | Not Available | Positive | 2292409 - 2293794 | 52179.6 |
| acetate coa-transferase subunit alpha | FE383_RS11345 | Not Available | Positive | 2293990 - 2294652 | 23527.7 |
| acetate coa-transferase subunit beta | FE383_RS11350 | Not Available | Positive | 2294652 - 2295302 | 22961.1 |
| tigr00366 family protein | FE383_RS11355 | Not Available | Positive | 2295299 - 2296621 | 47530.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





