Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i toxin-antitoxin system toxin mokc | FE383_RS00080 | Not Available | Negative | 16751 - 16903 | 5501.89 |
| na+/h+ antiporter nhaa | FE383_RS00085 | Not Available | Positive | 17489 - 18655 | 41358.3 |
| transcriptional activator nhar | FE383_RS00090 | Not Available | Positive | 18721 - 19620 | 34068.1 |
| hypothetical protein | FE383_RS22420 | Not Available | Negative | 19658 - 19795 | 5231.22 |
| is1-like element is1a family transposase | FE383_RS00095 | Not Available | Negative | 19811 - 20508 | 26455.2 |
| 30s ribosomal protein s20 | FE383_RS00100 | Not Available | Negative | 20815 - 21078 | 9684.94 |
| duf2575 family protein | FE383_RS00105 | Not Available | Positive | 21181 - 21399 | 7890.84 |
| bifunctional riboflavin kinase/fad synthetase | FE383_RS00110 | Not Available | Positive | 21407 - 22348 | 34736.4 |
| isoleucine--trna ligase | FE383_RS00115 | Not Available | Positive | 22391 - 25207 | 104302.0 |
| signal peptidase ii | FE383_RS00120 | Not Available | Positive | 25207 - 25701 | 18157.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





