Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| catecholate siderophore receptor cira | FE383_RS11015 | Not Available | Negative | 2215321 - 2217312 | 73899.5 |
| lysine-specific permease | FE383_RS11020 | Not Available | Negative | 2217606 - 2219075 | 53579.0 |
| dna-binding transcriptional regulator yeie | FE383_RS11025 | Not Available | Negative | 2219280 - 2220161 | 32725.7 |
| yeih family protein | FE383_RS11030 | Not Available | Positive | 2220260 - 2221309 | 36884.3 |
| deoxyribonuclease iv | FE383_RS11035 | Not Available | Positive | 2221383 - 2222240 | 31481.2 |
| sugar kinase | FE383_RS11040 | Not Available | Positive | 2222243 - 2223331 | 39712.6 |
| nupc/nupg family nucleoside cnt transporter | FE383_RS11045 | Not Available | Negative | 2223438 - 2224688 | 43412.3 |
| ribosylpyrimidine nucleosidase | FE383_RS11050 | Not Available | Negative | 2224788 - 2225729 | 33750.1 |
| transcriptional regulator yeil | FE383_RS11055 | Not Available | Positive | 2225859 - 2226557 | 26888.7 |
| nupc/nupg family nucleoside cnt transporter | FE383_RS11060 | Not Available | Negative | 2226628 - 2227878 | 43434.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





