Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2542 family protein | FE383_RS10965 | Not Available | Positive | 2204143 - 2204382 | 9264.61 |
| nad-dependent dihydropyrimidine dehydrogenase subunit pret | FE383_RS10970 | Not Available | Positive | 2204576 - 2205814 | 44332.0 |
| nad-dependent dihydropyrimidine dehydrogenase subunit prea | FE383_RS10975 | Not Available | Positive | 2205808 - 2207043 | 45071.4 |
| galactose/methyl galactoside abc transporter permease mglc | FE383_RS10980 | Not Available | Negative | 2207286 - 2208296 | 35552.4 |
| galactose/methyl galactoside abc transporter atp-binding protein mgla | FE383_RS10985 | Not Available | Negative | 2208312 - 2209832 | 56418.8 |
| galactose/glucose abc transporter substrate-binding protein mglb | FE383_RS10990 | Not Available | Negative | 2209893 - 2210891 | 35714.5 |
| hth-type transcriptional regulator gals | FE383_RS10995 | Not Available | Negative | 2211171 - 2212211 | 37359.0 |
| duf418 domain-containing protein yeib | FE383_RS11000 | Not Available | Negative | 2212353 - 2213510 | 43396.2 |
| gtp cyclohydrolase i fole | FE383_RS11005 | Not Available | Negative | 2213527 - 2214195 | 24832.1 |
| s-formylglutathione hydrolase | FE383_RS11010 | Not Available | Positive | 2214453 - 2215289 | 31260.9 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





