Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FE383_RS10815 | Not Available | Positive | 2167017 - 2170812 | 138387.0 |
| duf4132 domain-containing protein yehi | FE383_RS10820 | Not Available | Positive | 2170822 - 2174454 | 138075.0 |
| protein yehk | FE383_RS10825 | Not Available | Positive | 2174515 - 2174832 | 12604.0 |
| atp-binding protein | FE383_RS10830 | Not Available | Positive | 2175139 - 2176227 | 39684.6 |
| duf5682 family protein | FE383_RS10835 | Not Available | Positive | 2176238 - 2178517 | 83394.8 |
| vwa domain-containing protein | FE383_RS10840 | Not Available | Positive | 2178510 - 2179646 | 42121.6 |
| swim zinc finger family protein | FE383_RS10845 | Not Available | Positive | 2179643 - 2181643 | 73552.9 |
| yehr family lipoprotein | FE383_RS10850 | Not Available | Positive | 2181768 - 2182229 | 16595.0 |
| duf1456 family protein | FE383_RS10855 | Not Available | Negative | 2182269 - 2182739 | 17973.9 |
| two-component system response regulator btsr | FE383_RS10860 | Not Available | Negative | 2182786 - 2183505 | 27401.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





