Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peroxide stress protein yaaa | FE383_RS00030 | Not Available | Negative | 5683 - 6459 | 29587.5 |
| alanine/glycine:cation symporter family protein | FE383_RS00035 | Not Available | Negative | 6529 - 7959 | 51665.9 |
| transaldolase | FE383_RS00040 | Not Available | Positive | 8238 - 9191 | 35221.2 |
| molybdopterin adenylyltransferase | FE383_RS00045 | Not Available | Positive | 9306 - 9893 | 21223.6 |
| acetate uptake transporter | FE383_RS00050 | Not Available | Negative | 9928 - 10494 | 20072.2 |
| acidic protein msyb | FE383_RS00055 | Not Available | Negative | 10643 - 11356 | 26666.5 |
| duf2541 family protein | FE383_RS00060 | Not Available | Negative | 11382 - 11786 | 14482.4 |
| molecular chaperone dnak | FE383_RS00065 | Not Available | Positive | 12163 - 14079 | 69118.9 |
| molecular chaperone dnaj | FE383_RS00070 | Not Available | Positive | 14168 - 15298 | 41102.8 |
| is4-like element is421 family transposase | FE383_RS00075 | Not Available | Positive | 15445 - 16557 | 40911.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





