Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tagatose-bisphosphate aldolase subunit gatz | FE383_RS10715 | Not Available | Negative | 2145602 - 2146864 | 47111.3 |
| tagatose-bisphosphate aldolase subunit gaty | FE383_RS10720 | Not Available | Negative | 2146893 - 2147747 | 30813.7 |
| class i fructose-bisphosphate aldolase | FE383_RS10725 | Not Available | Negative | 2148055 - 2149107 | 38111.4 |
| nucleoside permease | FE383_RS10730 | Not Available | Positive | 2149364 - 2150641 | 47361.8 |
| adp-ribosylglycohydrolase family protein | FE383_RS10735 | Not Available | Positive | 2150638 - 2151642 | 35622.5 |
| carbohydrate kinase family protein | FE383_RS10740 | Not Available | Positive | 2151639 - 2152604 | 34387.4 |
| gntr family transcriptional regulator | FE383_RS10745 | Not Available | Negative | 2152578 - 2153324 | 28278.8 |
| glycoside hydrolase family 25 protein | FE383_RS10750 | Not Available | Negative | 2153376 - 2154194 | 31605.7 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | FE383_RS10755 | Not Available | Negative | 2154259 - 2155059 | 28635.2 |
| hydroxyethylthiazole kinase | FE383_RS10760 | Not Available | Negative | 2155056 - 2155844 | 27340.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





