Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i toxin-antitoxin system ibs family toxin | FE383_RS10610 | Not Available | Negative | 2124277 - 2124333 | 2063.86 |
| multidrug efflux rnd transporter subunit mdta | FE383_RS10615 | Not Available | Positive | 2124612 - 2125859 | 44466.8 |
| multidrug efflux rnd transporter permease subunit mdtb | FE383_RS10620 | Not Available | Positive | 2125859 - 2128981 | 112084.0 |
| multidrug efflux rnd transporter permease subunit mdtc | FE383_RS10625 | Not Available | Positive | 2128982 - 2132059 | 111017.0 |
| mfs transporter | FE383_RS10630 | Not Available | Positive | 2132060 - 2133475 | 50904.2 |
| two-component system sensor histidine kinase baes | FE383_RS10635 | Not Available | Positive | 2133472 - 2134875 | 51994.4 |
| two-component system response regulator baer | FE383_RS10640 | Not Available | Positive | 2134872 - 2135594 | 27657.5 |
| yegp family protein | FE383_RS10645 | Not Available | Positive | 2135785 - 2136117 | 12024.9 |
| trna 5-hydroxyuridine modification protein yegq | FE383_RS10650 | Not Available | Positive | 2136264 - 2137625 | 51196.1 |
| prophage transcriptional regulator ogrk | FE383_RS10655 | Not Available | Negative | 2137898 - 2138116 | 8430.14 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





