Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dctp deaminase | FE383_RS10560 | Not Available | Negative | 2112230 - 2112811 | 21250.5 |
| uridine kinase | FE383_RS10565 | Not Available | Negative | 2112903 - 2113544 | 24354.6 |
| diguanylate cyclase | FE383_RS10570 | Not Available | Positive | 2113862 - 2117179 | 123894.0 |
| dna-3-methyladenine glycosylase 2 | FE383_RS10575 | Not Available | Negative | 2117288 - 2118136 | 31395.0 |
| molecular chaperone | FE383_RS10580 | Not Available | Positive | 2118270 - 2119622 | 49374.2 |
| protein kinase yegi | FE383_RS10585 | Not Available | Negative | 2119635 - 2121581 | 71642.9 |
| yegj family protein | FE383_RS10590 | Not Available | Positive | 2121781 - 2122242 | 17428.8 |
| protein-serine/threonine phosphatase pphc | FE383_RS10595 | Not Available | Negative | 2122307 - 2123068 | 27209.5 |
| vwa domain-containing protein | FE383_RS10600 | Not Available | Negative | 2123065 - 2123724 | 24219.0 |
| type i toxin-antitoxin system toxin ibsa | FE383_RS10605 | Not Available | Negative | 2123945 - 2124004 | 2232.03 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





