Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FE383_RS10460 | Not Available | Negative | 2091846 - 2092289 | 17278.8 |
| glycosyltransferase family 4 protein | FE383_RS10465 | Not Available | Negative | 2092291 - 2093409 | 43190.4 |
| daph/dapd/glmu-related protein | FE383_RS10470 | Not Available | Negative | 2093394 - 2093984 | 21676.4 |
| hypothetical protein | FE383_RS10475 | Not Available | Negative | 2093965 - 2094946 | 33344.0 |
| o16 family o-antigen polymerase | FE383_RS10480 | Not Available | Negative | 2094949 - 2096115 | 44746.8 |
| udp-galactopyranose mutase | FE383_RS10485 | Not Available | Negative | 2096115 - 2097218 | 42968.1 |
| o16 family o-antigen flippase | FE383_RS10490 | Not Available | Negative | 2097226 - 2098473 | 45385.4 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | FE383_RS10495 | Not Available | Negative | 2098470 - 2099027 | 21271.2 |
| hypothetical protein | FE383_RS10500 | Not Available | Negative | 2099027 - 2099188 | 6133.43 |
| hypothetical protein | FE383_RS10505 | Not Available | Negative | 2099188 - 2099484 | 11170.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





