Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase hisb | FE383_RS10410 | Not Available | Positive | 2082368 - 2083435 | 40280.3 |
| imidazole glycerol phosphate synthase subunit hish | FE383_RS10415 | Not Available | Positive | 2083435 - 2084025 | 21654.1 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | FE383_RS10420 | Not Available | Positive | 2084025 - 2084762 | 26034.2 |
| imidazole glycerol phosphate synthase subunit hisf | FE383_RS10425 | Not Available | Positive | 2084744 - 2085520 | 28456.1 |
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisie | FE383_RS10430 | Not Available | Positive | 2085514 - 2086125 | 22757.1 |
| lps o-antigen chain length determinant protein wzzb | FE383_RS10435 | Not Available | Negative | 2086221 - 2087201 | 36456.9 |
| udp-glucose 6-dehydrogenase | FE383_RS10440 | Not Available | Negative | 2087347 - 2088513 | 43659.3 |
| nadp-dependent phosphogluconate dehydrogenase | FE383_RS10445 | Not Available | Negative | 2088762 - 2090168 | 51484.1 |
| hypothetical protein | FE383_RS10450 | Not Available | Negative | 2090296 - 2090649 | 13914.7 |
| is5-like element is5 family transposase | FE383_RS10455 | Not Available | Negative | 2090795 - 2091775 | 37853.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





