Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FE383_RS10310 | Not Available | Positive | 2067080 - 2067160 | 3069.82 |
| hypothetical protein | FE383_RS10315 | Not Available | Negative | 2067449 - 2067577 | 4843.84 |
| eutp/pduv family microcompartment system protein | FE383_RS10320 | Not Available | Positive | 2067649 - 2067831 | 6419.74 |
| duf496 family protein | FE383_RS10325 | Not Available | Negative | 2067932 - 2068261 | 12778.5 |
| fusc family protein | FE383_RS10330 | Not Available | Negative | 2068433 - 2069491 | 39957.7 |
| dna gyrase inhibitor sbmc | FE383_RS10335 | Not Available | Negative | 2069689 - 2070162 | 18082.4 |
| serine-type d-ala-d-ala carboxypeptidase dacd | FE383_RS10340 | Not Available | Negative | 2070281 - 2071447 | 43348.5 |
| exodeoxyribonuclease i | FE383_RS10345 | Not Available | Positive | 2071656 - 2073083 | 54503.7 |
| thiosulfate utilization sulfurtransferase tsub/yeed | FE383_RS10350 | Not Available | Negative | 2073126 - 2073353 | 8148.73 |
| thiosulfate utilization transporter tsua/yeee | FE383_RS10355 | Not Available | Negative | 2073367 - 2074425 | 38102.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





