Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional regulator cbl | FE383_RS10200 | Not Available | Negative | 2048864 - 2049814 | 35858.0 |
| nitrogen assimilation transcriptional regulator nac | FE383_RS10205 | Not Available | Negative | 2049916 - 2050833 | 32837.0 |
| Trna-asn | Not Available | Not Available | Positive | 2051160 - 2051235 | Not Available |
| l,d-transpeptidase | FE383_RS10215 | Not Available | Negative | 2051291 - 2052226 | 34544.3 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | FE383_RS10220 | Not Available | Negative | 2052288 - 2053367 | 36989.3 |
| adenosylcobinamide-gdp ribazoletransferase | FE383_RS10225 | Not Available | Negative | 2053379 - 2054122 | 26387.3 |
| bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | FE383_RS10230 | Not Available | Negative | 2054119 - 2054664 | 20165.2 |
| hypothetical protein | FE383_RS22625 | Not Available | Negative | 2054816 - 2054989 | 6270.48 |
| is5-like element is5 family transposase | FE383_RS10240 | Not Available | Negative | 2055205 - 2056185 | 37825.6 |
| hypothetical protein | FE383_RS10255 | Not Available | Positive | 2057535 - 2057840 | 11041.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





