Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dgsa anti-repressor mtfa | FE383_RS10150 | Not Available | Positive | 2032551 - 2033348 | 30280.7 |
| Trna-asn | Not Available | Not Available | Positive | 2033449 - 2033524 | Not Available |
| inverse autotransporter adhesin yeej | FE383_RS10160 | Not Available | Positive | 2033838 - 2040914 | 248583.0 |
| hypothetical protein | FE383_RS10165 | Not Available | Negative | 2041176 - 2042228 | 39270.1 |
| shikimate transporter | FE383_RS10170 | Not Available | Positive | 2042543 - 2043859 | 47820.2 |
| amp nucleosidase | FE383_RS10175 | Not Available | Positive | 2043961 - 2045415 | 53997.9 |
| yebc/pmpr family dna-binding transcriptional regulator | FE383_RS10180 | Not Available | Positive | 2045758 - 2046474 | 25868.5 |
| Trna-asn | Not Available | Not Available | Positive | 2046927 - 2047002 | Not Available |
| toxic metabolite efflux mate transporter yeeo | FE383_RS10190 | Not Available | Negative | 2047103 - 2048590 | 54201.8 |
| Trna-asn | Not Available | Not Available | Positive | 2048751 - 2048826 | Not Available |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





