Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FE383_RS10095 | Not Available | Positive | 2022972 - 2024143 | 41320.8 |
| glyoxalase iii hcha | FE383_RS10105 | Not Available | Positive | 2024735 - 2025586 | 31192.1 |
| two-component system sensor histidine kinase hprs | FE383_RS10110 | Not Available | Negative | 2025694 - 2027052 | 50852.7 |
| response regulator transcription factor hprr | FE383_RS10115 | Not Available | Negative | 2027052 - 2027723 | 25019.2 |
| hydroxyisourate hydrolase | FE383_RS10120 | Not Available | Positive | 2027856 - 2028269 | 15460.4 |
| protein-methionine-sulfoxide reductase catalytic subunit msrp | FE383_RS10125 | Not Available | Positive | 2028378 - 2029382 | 37414.9 |
| protein-methionine-sulfoxide reductase heme-binding subunit msrq | FE383_RS10130 | Not Available | Positive | 2029383 - 2030018 | 24069.6 |
| metal-binding protein zint | FE383_RS10135 | Not Available | Positive | 2030275 - 2030925 | 24763.1 |
| cytochrome b | FE383_RS10140 | Not Available | Positive | 2031268 - 2031798 | 20338.4 |
| Trna-ser | Not Available | Not Available | Positive | 2032368 - 2032457 | Not Available |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





