Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfurtransferase-like selenium metabolism protein yedf | FE383_RS09930 | Not Available | Positive | 1998380 - 1998613 | 8639.5 |
| sos response-associated peptidase | FE383_RS09935 | Not Available | Positive | 1998722 - 1999390 | 24980.5 |
| gnat family n-acetyltransferase | FE383_RS09940 | Not Available | Positive | 1999501 - 1999980 | 17892.5 |
| hypothetical protein | FE383_RS09950 | Not Available | Negative | 2000124 - 2001252 | 42506.7 |
| flagellar hook-basal body complex protein flie | FE383_RS09960 | Not Available | Negative | 2001601 - 2001915 | 11127.5 |
| flagellar basal-body ms-ring/collar protein flif | FE383_RS09965 | Not Available | Positive | 2002130 - 2003788 | 60592.6 |
| flagellar motor switch protein flig | FE383_RS09970 | Not Available | Positive | 2003781 - 2004776 | 36778.2 |
| flagellar assembly protein flih | FE383_RS09975 | Not Available | Positive | 2004769 - 2005455 | 25051.6 |
| hypothetical protein | FE383_RS09980 | Not Available | Positive | 2005455 - 2006827 | 49856.2 |
| flagellar export protein flij | FE383_RS09985 | Not Available | Positive | 2006846 - 2007289 | 17307.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





