Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | FE383_RS09835 | Not Available | Negative | 1981170 - 1981718 | 20701.7 |
| excinuclease abc subunit uvrc | FE383_RS09840 | Not Available | Negative | 1981775 - 1983607 | 68163.9 |
| uvry/sira/gaca family response regulator transcription factor | FE383_RS09845 | Not Available | Negative | 1983604 - 1984260 | 23894.1 |
| hypothetical protein | FE383_RS22850 | Not Available | Positive | 1984402 - 1984473 | 2652.24 |
| protein yecu | FE383_RS09850 | Not Available | Positive | 1984556 - 1984732 | 6767.46 |
| duf2594 family protein yecf | FE383_RS09855 | Not Available | Positive | 1984719 - 1984943 | 8239.04 |
| transcriptional regulator sdia | FE383_RS09860 | Not Available | Negative | 1985011 - 1985733 | 28118.9 |
| l-cystine abc transporter atp-binding protein tcyn | FE383_RS09865 | Not Available | Negative | 1985963 - 1986715 | 27678.7 |
| cystine abc transporter permease | FE383_RS09870 | Not Available | Negative | 1986712 - 1987380 | 24802.7 |
| d-cysteine desulfhydrase | FE383_RS09875 | Not Available | Negative | 1987395 - 1988381 | 35155.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





