Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein yode | FE383_RS22505 | Not Available | Negative | 2441041 - 2441187 | 5068.08 |
| Tail fiber assembly protein | FE383_RS12010 | Not Available | Positive | 2441359 - 2441649 | 10557.3 |
| Tail fiber assembly protein | FE383_RS12015 | Not Available | Negative | 2441621 - 2442061 | 16409.1 |
| Phage tail collar domain protein | FE383_RS12020 | Not Available | Negative | 2442088 - 2442723 | 22551.1 |
| Dna adenine methylase | FE383_RS12025 | Not Available | Negative | 2442665 - 2442931 | 10052.7 |
| Perc transcriptional activator family protein | FE383_RS12030 | Not Available | Negative | 2442931 - 2443425 | 18767.1 |
| O protein family protein | FE383_RS22370 | Not Available | Negative | 2443422 - 2444129 | 26628.7 |
| Hypothetical protein | FE383_RS12040 | Not Available | Positive | 2444148 - 2444510 | 13102.6 |
| Hypothetical protein | FE383_RS12045 | Not Available | Positive | 2444576 - 2445400 | 30444.1 |
| Hypothetical protein | FE383_RS12050 | Not Available | Positive | 2445528 - 2446064 | 20256.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





