Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trimethylamine n-oxide reductase torz | FE383_RS09640 | Not Available | Negative | 1943494 - 1945923 | 88968.9 |
| napc/nirt family cytochrome c | FE383_RS09645 | Not Available | Negative | 1945948 - 1947048 | 40288.5 |
| copper homeostasis protein cutc | FE383_RS09650 | Not Available | Negative | 1947436 - 1948182 | 26763.4 |
| voc family protein | FE383_RS09655 | Not Available | Negative | 1948196 - 1948762 | 21206.2 |
| arginine--trna ligase | FE383_RS09660 | Not Available | Positive | 1948978 - 1950711 | 64686.7 |
| protein yecv | FE383_RS22495 | Not Available | Negative | 1950753 - 1950797 | 1630.04 |
| lysozyme inhibitor lpri family protein | FE383_RS09665 | Not Available | Positive | 1950888 - 1951376 | 18886.2 |
| flagellar protein flhe | FE383_RS09670 | Not Available | Negative | 1951496 - 1951888 | 14060.3 |
| flagellar biosynthesis protein flha | FE383_RS09675 | Not Available | Negative | 1951888 - 1953966 | 74847.6 |
| flagellar biosynthesis protein flhb | FE383_RS09680 | Not Available | Negative | 1953959 - 1955107 | 42240.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





