Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator hexr | FE383_RS09540 | Not Available | Positive | 1925568 - 1926437 | 31977.4 |
| pyruvate kinase | FE383_RS09545 | Not Available | Positive | 1926565 - 1928007 | 51360.3 |
| lauroyl-kdo(2)-lipid iv(a) myristoyltransferase | FE383_RS09550 | Not Available | Negative | 1928138 - 1929109 | 37412.5 |
| murein dd-endopeptidase mepm | FE383_RS09555 | Not Available | Negative | 1929229 - 1930551 | 49060.6 |
| zinc abc transporter substrate-binding protein znua | FE383_RS09560 | Not Available | Negative | 1930567 - 1931499 | 33779.2 |
| zinc abc transporter atp-binding protein znuc | FE383_RS09565 | Not Available | Positive | 1931578 - 1932333 | 27869.3 |
| zinc abc transporter permease subunit znub | FE383_RS09570 | Not Available | Positive | 1932330 - 1933115 | 27730.4 |
| holliday junction branch migration dna helicase ruvb | FE383_RS09575 | Not Available | Negative | 1933262 - 1934272 | 37176.0 |
| holliday junction branch migration protein ruva | FE383_RS09580 | Not Available | Negative | 1934281 - 1934892 | 22087.0 |
| stress response small protein yobi | FE383_RS09585 | Not Available | Negative | 1935031 - 1935096 | 2665.42 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





