Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbon-nitrogen hydrolase family protein yobb | FE383_RS09490 | Not Available | Positive | 1914356 - 1915012 | 24396.4 |
| exodeoxyribonuclease x | FE383_RS09495 | Not Available | Positive | 1915036 - 1915698 | 25134.5 |
| oligopeptidase b | FE383_RS09500 | Not Available | Negative | 1915695 - 1917755 | 79494.8 |
| tellurite resistance terb family protein | FE383_RS09505 | Not Available | Negative | 1917964 - 1918623 | 23688.2 |
| protein yebf | FE383_RS09510 | Not Available | Negative | 1918950 - 1919306 | 12962.4 |
| dna damage-inducible protein yebg | FE383_RS09515 | Not Available | Negative | 1919373 - 1919663 | 10717.5 |
| formate-dependent phosphoribosylglycinamide formyltransferase | FE383_RS09520 | Not Available | Positive | 1919797 - 1920975 | 42436.2 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | FE383_RS09525 | Not Available | Negative | 1921031 - 1921672 | 22285.3 |
| phosphogluconate dehydratase | FE383_RS09530 | Not Available | Negative | 1921709 - 1923520 | 64642.9 |
| glucose-6-phosphate dehydrogenase | FE383_RS09535 | Not Available | Negative | 1923755 - 1925230 | 55707.5 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





