Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2627 domain-containing protein | FE383_RS09390 | Not Available | Negative | 1896364 - 1896507 | 5212.44 |
| yebo family protein | FE383_RS09395 | Not Available | Negative | 1897177 - 1897464 | 10793.1 |
| phop/phoq regulator mgrb | FE383_RS09400 | Not Available | Negative | 1897539 - 1897682 | 5552.09 |
| yobh family protein | FE383_RS09405 | Not Available | Positive | 1897841 - 1898080 | 8514.67 |
| dna-binding transcriptional regulator kdgr | FE383_RS09410 | Not Available | Negative | 1898224 - 1899015 | 30031.1 |
| mfs transporter | FE383_RS09415 | Not Available | Positive | 1899192 - 1900565 | 48154.7 |
| protease htpx | FE383_RS09420 | Not Available | Negative | 1900611 - 1901492 | 31925.3 |
| carboxy terminal-processing peptidase | FE383_RS09425 | Not Available | Negative | 1901684 - 1903732 | 76667.3 |
| rna chaperone proq | FE383_RS09430 | Not Available | Negative | 1903752 - 1904450 | 25894.0 |
| l-methionine (r)-s-oxide reductase | FE383_RS09435 | Not Available | Negative | 1904547 - 1905044 | 18122.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





