Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| long-chain-fatty-acid--coa ligase fadd | FE383_RS09295 | Not Available | Negative | 1876977 - 1878662 | 62335.7 |
| slp family lipoprotein yeay | FE383_RS09300 | Not Available | Negative | 1878867 - 1879448 | 20922.4 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | FE383_RS09305 | Not Available | Negative | 1879488 - 1880183 | 25182.3 |
| atp-dependent dna helicase | FE383_RS09310 | Not Available | Negative | 1880241 - 1882151 | 70381.9 |
| rida family protein | FE383_RS09315 | Not Available | Positive | 1882283 - 1882627 | 12493.9 |
| duf1889 family protein | FE383_RS09320 | Not Available | Positive | 1883049 - 1883348 | 10836.0 |
| yoah family protein | FE383_RS09325 | Not Available | Negative | 1883468 - 1883647 | 6554.7 |
| aminodeoxychorismate synthase component 1 | FE383_RS09330 | Not Available | Positive | 1883721 - 1885082 | 50956.3 |
| coa pyrophosphatase | FE383_RS09335 | Not Available | Positive | 1885086 - 1885664 | 21436.9 |
| l-serine ammonia-lyase | FE383_RS09340 | Not Available | Positive | 1885848 - 1887212 | 48909.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





