Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ynfa family protein | FE383_RS08145 | Not Available | Negative | 1644264 - 1644590 | 11920.2 |
| duf1283 family protein | FE383_RS08150 | Not Available | Positive | 1644725 - 1645066 | 12909.3 |
| Hypothetical protein | FE383_RS08155 | Not Available | Positive | 1645101 - 1645661 | 21888.2 |
| Hypothetical protein | FE383_RS11975 | Not Available | Positive | 2435845 - 2436777 | 34505.2 |
| Trna-arg; | Not Available | Not Available | Positive | 2436853 - 2436927 | Not Available |
| Attl | Not Available | Not Available | Positive | 2436898 - 2436913 | Not Available |
| Cps-53 (kple1) prophage | FE383_RS11985 | Not Available | Positive | 2437089 - 2438246 | 44063.5 |
| Putative flippase | FE383_RS11990 | Not Available | Positive | 2438399 - 2438761 | 13226.5 |
| Bactoprenol glucosyltransferase | FE383_RS11995 | Not Available | Positive | 2438758 - 2439678 | 34637.4 |
| Serotype specific glucosyltransferase | FE383_RS12000 | Not Available | Positive | 2439675 - 2441006 | 51486.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





