Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mischarged aminoacyl-trna deacylase | FE383_RS09195 | Not Available | Positive | 1862490 - 1862993 | 17851.7 |
| small membrane protein yoai | FE383_RS09200 | Not Available | Negative | 1862994 - 1863098 | 3771.77 |
| duf441 domain-containing protein | FE383_RS09205 | Not Available | Positive | 1863268 - 1863714 | 15256.6 |
| dna-binding transcriptional regulator nimr | FE383_RS09210 | Not Available | Negative | 1863671 - 1864492 | 30555.4 |
| 2-nitroimidazole transporter | FE383_RS09215 | Not Available | Positive | 1864589 - 1865770 | 41210.8 |
| duf488 domain-containing protein | FE383_RS09220 | Not Available | Positive | 1865825 - 1866172 | 13386.9 |
| duf333 domain-containing lipoprotein yoaf | FE383_RS09225 | Not Available | Negative | 1866194 - 1866448 | 8942.87 |
| diguanylate cyclase dgcp | FE383_RS09230 | Not Available | Positive | 1866631 - 1867656 | 38547.8 |
| yoak family small membrane protein | FE383_RS09235 | Not Available | Positive | 1867689 - 1867787 | 3458.45 |
| protein yoaj | FE383_RS09240 | Not Available | Positive | 1867790 - 1867864 | 2691.57 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





