Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asparaginase | FE383_RS09095 | Not Available | Positive | 1839776 - 1840792 | 37129.5 |
| bifunctional nicotinamidase/pyrazinamidase | FE383_RS09100 | Not Available | Positive | 1840803 - 1841444 | 23363.3 |
| mfs transporter | FE383_RS09105 | Not Available | Negative | 1841537 - 1842895 | 50321.0 |
| deor/glpr family dna-binding transcription regulator | FE383_RS09110 | Not Available | Negative | 1843012 - 1843770 | 28263.1 |
| nadh-dependent methylglyoxal reductase | FE383_RS09115 | Not Available | Negative | 1843907 - 1844887 | 36330.9 |
| sugar kinase | FE383_RS09120 | Not Available | Negative | 1844897 - 1845844 | 34123.2 |
| ketose-bisphosphate aldolase | FE383_RS09125 | Not Available | Negative | 1845849 - 1846685 | 30811.5 |
| nad(p)-dependent alcohol dehydrogenase | FE383_RS09130 | Not Available | Negative | 1846706 - 1847749 | 37703.0 |
| mfs transporter | FE383_RS09135 | Not Available | Negative | 1847766 - 1849145 | 49604.9 |
| zinc-binding dehydrogenase | FE383_RS09140 | Not Available | Negative | 1849172 - 1850248 | 38733.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





