Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ai-2e family transporter ydik | FE383_RS08695 | Not Available | Positive | 1757990 - 1759102 | 39843.7 |
| Ncrna_class:antisense_rna | Not Available | Not Available | Positive | 1759288 - 1759395 | Not Available |
| ydil family protein | FE383_RS08705 | Not Available | Positive | 1759531 - 1759887 | 13929.7 |
| mfs transporter | FE383_RS08710 | Not Available | Positive | 1759987 - 1761201 | 44610.7 |
| mfs transporter | FE383_RS08715 | Not Available | Positive | 1761428 - 1762693 | 46083.0 |
| quinate/shikimate dehydrogenase | FE383_RS08720 | Not Available | Positive | 1762705 - 1763571 | 31229.6 |
| type i 3-dehydroquinate dehydratase | FE383_RS08725 | Not Available | Positive | 1763602 - 1764360 | 27468.2 |
| acyl coa:acetate/3-ketoacid coa transferase | FE383_RS08730 | Not Available | Positive | 1764503 - 1766098 | 57565.7 |
| acyl-coa dehydrogenase | FE383_RS08735 | Not Available | Positive | 1766112 - 1767263 | 43004.6 |
| arac family transcriptional regulator | FE383_RS08740 | Not Available | Negative | 1767306 - 1768217 | 34896.2 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





