Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anhydro-n-acetylmuramic acid kinase | FE383_RS08450 | Not Available | Negative | 1707409 - 1708518 | 39498.6 |
| outer membrane lipoprotein slyb | FE383_RS08455 | Not Available | Positive | 1708792 - 1709259 | 15602.7 |
| transcriptional regulator slya | FE383_RS08460 | Not Available | Negative | 1709306 - 1709740 | 16354.0 |
| duf1656 domain-containing protein | FE383_RS08465 | Not Available | Positive | 1709941 - 1710177 | 8891.33 |
| hlyd family secretion protein | FE383_RS08470 | Not Available | Positive | 1710180 - 1711037 | 31497.5 |
| fusc family protein | FE383_RS08475 | Not Available | Positive | 1711037 - 1713049 | 75271.0 |
| superoxide dismutase | FE383_RS08480 | Not Available | Negative | 1713050 - 1713571 | 17682.0 |
| aldo/keto reductase family oxidoreductase | FE383_RS08485 | Not Available | Negative | 1713652 - 1714548 | 33677.6 |
| duf1289 domain-containing protein | FE383_RS08490 | Not Available | Negative | 1714597 - 1714836 | 9359.15 |
| dna-binding transcriptional regulator nemr | FE383_RS08495 | Not Available | Positive | 1714939 - 1715538 | 22276.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





