Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| electron transport complex subunit rsxd | FE383_RS08400 | Not Available | Positive | 1698058 - 1699116 | 38142.4 |
| electron transport complex subunit rsxg | FE383_RS08405 | Not Available | Positive | 1699120 - 1699740 | 21913.1 |
| electron transport complex subunit rsxe | FE383_RS08410 | Not Available | Positive | 1699744 - 1700439 | 24460.5 |
| endonuclease iii | FE383_RS08415 | Not Available | Positive | 1700439 - 1701074 | 23563.7 |
| dipeptide/tripeptide permease dtpa | FE383_RS08420 | Not Available | Positive | 1701685 - 1703187 | 53994.4 |
| glutathione transferase gsta | FE383_RS08425 | Not Available | Positive | 1703293 - 1703898 | 22869.6 |
| pyridoxal kinase | FE383_RS08430 | Not Available | Negative | 1703942 - 1704805 | 31324.1 |
| tyrosine--trna ligase | FE383_RS08435 | Not Available | Negative | 1704864 - 1706138 | 47529.6 |
| pyridoxamine 5'-phosphate oxidase | FE383_RS08440 | Not Available | Negative | 1706267 - 1706923 | 25546.6 |
| c-type lysozyme inhibitor | FE383_RS08445 | Not Available | Negative | 1706982 - 1707311 | 12568.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





