Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ai-2 transporter tqsa | FE383_RS08250 | Not Available | Positive | 1662829 - 1663863 | 37545.3 |
| re/si-specific nad(p)(+) transhydrogenase subunit beta | FE383_RS08255 | Not Available | Negative | 1663888 - 1665276 | 48726.0 |
| re/si-specific nad(p)(+) transhydrogenase subunit alpha | FE383_RS08260 | Not Available | Negative | 1665287 - 1666819 | 54626.6 |
| duf1471 family protein ydgh | FE383_RS08265 | Not Available | Positive | 1667343 - 1668287 | 33905.1 |
| amino acid permease | FE383_RS08270 | Not Available | Positive | 1668473 - 1669855 | 49504.5 |
| dihydromonapterin reductase | FE383_RS08275 | Not Available | Positive | 1669892 - 1670614 | 26349.8 |
| glpm family protein | FE383_RS08280 | Not Available | Negative | 1670611 - 1670946 | 12323.8 |
| two-component system response regulator rsta | FE383_RS08285 | Not Available | Positive | 1671075 - 1671794 | 26705.4 |
| two-component system sensor histidine kinase rstb | FE383_RS08290 | Not Available | Positive | 1671798 - 1673099 | 49285.8 |
| dna replication terminus site-binding protein | FE383_RS08295 | Not Available | Positive | 1673175 - 1674104 | 35785.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





