Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Host killer protein | FE383_RS08045 | Not Available | Negative | 1634036 - 1634191 | 5737.24 |
| type ii toxin-antitoxin system mrna interferase rele | FE383_RS08050 | Not Available | Negative | 1634263 - 1634550 | 11225.8 |
| type ii toxin-antitoxin system antitoxin relb | FE383_RS08055 | Not Available | Negative | 1634550 - 1634789 | 9072.01 |
| protein ydfv | FE383_RS08060 | Not Available | Positive | 1634814 - 1635119 | 11308.8 |
| flxa-like family protein | FE383_RS08065 | Not Available | Positive | 1635322 - 1635654 | 12208.4 |
| protein ydfw | FE383_RS08070 | Not Available | Negative | 1636091 - 1636240 | 5881.1 |
| protein ydfx | FE383_RS08075 | Not Available | Negative | 1636275 - 1636553 | 10717.0 |
| Putative cro anti-repressor | FE383_RS08080 | Not Available | Negative | 1636537 - 1636767 | 8578.22 |
| Putative transcriptional repressor dica | FE383_RS08085 | Not Available | Positive | 1636851 - 1637258 | 15656.9 |
| Hypothetical protein | FE383_RS08090 | Not Available | Positive | 1637425 - 1637580 | 5792.67 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





