Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trans-aconitate 2-methyltransferase | FE383_RS07795 | Not Available | Positive | 1596263 - 1597021 | 29007.5 |
| bestrophin family protein | FE383_RS07800 | Not Available | Negative | 1597025 - 1597939 | 34811.0 |
| tagaturonate reductase | FE383_RS07805 | Not Available | Negative | 1598146 - 1599597 | 54811.3 |
| hypothetical protein | FE383_RS07810 | Not Available | Negative | 1599824 - 1600810 | 35723.9 |
| duf4186 domain-containing protein | FE383_RS07815 | Not Available | Negative | 1600883 - 1601242 | 13544.5 |
| glutaminase b | FE383_RS07820 | Not Available | Negative | 1601242 - 1602168 | 33517.6 |
| succinate-semialdehyde dehydrogenase | FE383_RS07825 | Not Available | Negative | 1602232 - 1603620 | 49720.7 |
| putrescine utilization regulator ptrr | FE383_RS07830 | Not Available | Positive | 1603721 - 1604602 | 32484.9 |
| putative protein ynek | FE383_RS07835 | Not Available | Positive | 1604680 - 1605795 | 42843.6 |
| l-arabinose mfs transporter | FE383_RS07840 | Not Available | Positive | 1605945 - 1607135 | 42540.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





